Hi Antony,

> Using xia2 with a reference dataset for both indexing and R-free seems to 
> work fine, apart from the fact that the resulting mtz file, now contains 
> R-free labels for reflections that have no observations… i.e. taken from the 
> higher resolution "reference dataset"; see output below.
> 
> I get essentially the same results using CAD to copy the R-free column 
> between mtzfiles….

This is exactly what xia2 does, so no surprise there. 

Does anyone have a neater CAD script which does this? Alternatively I guess it 
would be the work of an hour or so using CCTBX Python to make it so… if no-one 
has a neat CAD script I will look at doing this.

It is untidy, I don't really like untidy things however I suspect it will make 
no difference at all - the missing values will be flagged as such so should not 
mess anything up.

Best wishes,

Graeme

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