CCP4 now has QtPISA, where the output is prettier than at the EBI :) Eugene
On 6 Jan 2013, at 12:42, Eleanor Dodson wrote: > pisa at the ebi will do this very nicely. > > Upload your pdb files. > > PISA is part of the CCP4 distribution too, but the EBI output is prettier > Eleanor > > On 4 Jan 2013, at 22:11, Brad Bennett wrote: > >> Hi all- >> I have 2 PDB files of the same protein (in slightly different states) and I >> want to output a table of interactions (preferably hydrogen bonds, salt >> bridges) that are unique to a structure i.e. Ser22 OG forms a hydrogen bond >> to Lys25 NZ in structure 1 but not in structure 2. In other words, I'd like >> to generate a difference set of contacts. Is there a way I can run NCONT or >> CONTACT or other software (or nifty scripting) to do this? >> >> Thanks and have a nice weekend- >> Brad -- Scanned by iCritical.
