[ccp4bb] Superposing nucleic acids

[Alan Cheung]

Dear all - is there a convention for superposing nucleic acids duplexes 
of unrelated sequence?

i.e. which atoms should be superposed : C4' of the sugar, P of the 
backbone, O3'/O5' of the backbone, or some combination thereof?

Alan


--
Alan Cheung
Gene Center
Ludwig-Maximilians-University
Feodor-Lynen-Str. 25
81377 Munich
Germany
Phone:  +49-89-2180-76845
Fax:  +49-89-2180-76999
E-mail: che...@lmb.uni-muenchen.de