Dear BBer,

As I hope you are all aware CCP4 has been well supported throughout its 
existence by BBSRC grant income. This Research Council funding is vital for the 
continued success of the CCP4 collaboration and to support its software 
development, distribution, and out-reach activities. This core funding has 
underpinned CCP4's activities and enabled us to generate commercial license 
income to complement the core grant.

On the 24th April 2013, we will be submitting  our five-yearly grant-renewal 
application to the BBSRC.  This will be reviewed over the next few months, and 
will be considered in the highly competitive, responsive mode funding meeting 
of BBSRC committee D in September/October.

We are writing to ask those of you who are keen that CCP4 should continue in 
its work to help in ensuring a positive outcome to this application.  
Historically, we have been fortunate to draw on letters of support that we have 
uploaded to the BBSRC, and which have had a number and weight that has helped 
to make the case for funding indisputable.  This year, BBSRC have indicated 
that this approach presents challenges to them in respect of identifying 
independent refereeing downstream. We are therefore proposing instead to 
collect and hold letters of support from users of the suite who wish to voice 
such support, but to provide the BBSRC with a summary analysis of those letters 
rather than with the letters themselves.

To keep numbers appropriate, we would really need to receive some sort of 
letter from PIs, Reserch Fellows, and senior postdocs.  Those letters should be 
specific about the high-impact work that CCP4 sustains, and ideally should 
reference the workplan that WG1 has agreed for the current renewal. This 
relates specifically to work packages as follows

WP0: "Cloud infrastructure", facilitating mobility of data and projects from 
site to site, ( especially synchrotrons to home lab to laptop) and providing 
access to powerful compute-resources to apply challenging algorithms to 
difficult problems.  Headed up by Eugen Krissinel

WP1: Improved integration of structure-determination with data collection at 
the synchrotron.  This involves feed-forward (better data passed  from data 
analysis to structure determination) and feed-back (better informed decision 
making at the synchrotron as a result of better use of automated pipelines to 
know how useful the data are as soon as possible). Headed up by

WP2: Improved models for MR.  This is to build on AMPLE to make better models 
for molecular replacement: an exciting area that will make unsolveable 
structures solveable.  Headed by Airlie McCoy and Dan Rigden

WP3: Atom-free and reparameterized atomic refinement.  A tool to make EM-models 
and/or poor homology models into a better starting point for solving 
structures.  Not unlike the morphing from PHENIX, but significantly different 
and possibly better.  Headed by Kevin Cowtan

WP4: Extending the statistical model for refinement to confront the real-world 
issues that data is compromised (overlapped, from multiple crystals, collected 
while the crystal is being zapped by a death-star(TM) grade death beam). Headed 
by Garib Murshudov

If you are such a person, or could persuade such a person to contribute, then 
please could we ask for your help.  Letters and/or e-msils should go to Keith 
Wilson ([email protected]<mailto:[email protected]>) AS SOON AS 
POSSIBLE, and no later than 16th April.

Many thanks for your help and support,

Martin

Professor Martin Noble
Northern Institute for Cancer Research
Paul O'Gorman Building
Medical School
Newcastle University
Framlington Place
Newcastle Upon Tyne
NE2 4HH

E-mail: [email protected]<mailto:[email protected]>
Direct line: +44 (0) 191 246 4466






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