Dear Group Members,
I'm attempting to configure CCP4 installation for the batch job
submission and have encountered numbers of problems.
The one that is currently haunting me is the error message:
can't read "CCP4I_TCLTK": no such variable
while executing
"exec $CCP4I_TCLTK/tclsh "$0" -- ${1+"$@"}"
(file "/share/apps/software/ccp4/share/ccp4i/bin/ccp4ish" line 9)
The variable in question is defined when the CCP4 is running in
interactive shell.
I have also added an 'echo $CCP4I_TCLTK' statement to the 'Command to
set up CCP4' which outputs (correct location for tclsh):
/share/apps/software/ccp4/bin
However, the same statement added to the 'Command to run CCP4i' outputs:
/share/apps/software/ccp4/bin -r /tmp/software/1_import.def
Our system is build on Rocks 6.1(Emerald Boa, CentOS 6.3).
The qsub is currently run with the following command:
qsub -V -q little -l nodes=1:ppn=1
I would highly appreciate suggestion on how to solve this
configuration problem.
Best regards, Andrzej Lyskowski
--
Dr. Andrzej Lyskowski
Core Facility Structural Biology
Enzyme Development and Analytics
ACIB - Austrian Centre of Industrial Biotechnology
+43 316 873 9301 tel +43 316 873 9302 fax
andrzej[.]lyskowski[@]acib[.]at
http://acib.at/
Petersgasse 14, A-8010 Graz, Austria
FB: 224687y FBG: HG Graz UID: ATU 54545504
c/o
IMB Institute of Molecular Biosciences, University of Graz
+43 316 380 5466 tel +43 316 380 9897 fax
andrzej[.]lyskowski[@]uni[-]graz[.]at
http://strubi.uni-graz.at/
Humboldtstrasse 50,III/194, A-8010 Graz, Austria
