On 14/01/14 15:51, Almudena Ponce Salvatierra wrote:
Dear all,
I am trying to refine an oligonucleotide chain in Coot and I get the
following message when I try:
"Fail to match (to the dictionary) the following model atom names:
G
O5* C5* O4* etc....
That would cause exploding atoms so the refinement did not start"
Does anyone know how to solve this?
Hello Almudena,
It seems that your model is inconsistent with the dictionary. I imagine
that the dictionary has PDB v3 prime names but your model has star names.
I don't know of a tool in ccp4 to do the conversion, but I think the
remediator will do this.
http://kinemage.biochem.duke.edu/software/remediator.php
Paul.
