Dear Sreetama,
For this, Gesamt from ccp4 should do the work. Run gesamt without parameters to
get instructions, they are basically the same as for ccp4's superpose.
HTH,
Eugene
On 19 Mar 2014, at 07:34, sreetama das wrote:
Dear All,
Is there a way to superpose multiple, discontinuous stretches of
residues between two protein chains ?
Dali output shows that there are discontinuous stretches between the PDBs that
are being aligned. But I can not find any option to download the superposed
PDB. The output generated from PDBefold (which gives link to the transformed
PDB) is different.
regards,
sreetama
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