You could try situs colores, which does fitting of model into map automatically.
Sent from Jack's iPhone > On Oct 23, 2014, at 12:49 PM, "jie liu" <[email protected]> wrote: > > Dear you all > > May I ask a question? I tried to dock my protein structure onto an cryo-EM > density map. I loaded both the map file and my model coordinates into > Chimera. But it looks apparently that they are not in the same size scale. My > model is much bigger than the size of the EM map region where the model is > supposed to reside. I suspect the EM map size is scaled down somehow. > > I did a little research on internet but couldn't find a solution. Could you > please advice me how to put them to the same size scale? > > Your kind help is greatly appreciated! > > Jie
