-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Hi Joel,
with Coot 0.8, revision 5348, I could generate and display the surface for insulin. I would take a screenshot of it, unless Paul has a different idea? You said you could generate the ESP - do you mean you can see it like in the screenshot, or do you not see anything at all? Best, Tim On 12/09/2014 11:50 PM, Joel Tyndall wrote: > Hi Tim, > > You have sparked my interest in Coot ESP. Do you know of a link to > explain how to display/export it? I can generate it but nothing > happens (other than the protein disappearing > > Cheers > > Joel > > -----Original Message----- From: CCP4 bulletin board > [mailto:[email protected]] On Behalf Of Tim Gruene Sent: > Wednesday, 10 December 2014 3:07 a.m. To: [email protected] > Subject: Re: [ccp4bb] pdb2pqr generation > > Dear abhishek, > > one work-around is to split the PDB-file into four different > PDB-files, one per chain, and concatenate the results back > together. > > Alternatively you can try Coot to calculate the ESP. > > Bst, Tim > > > On 12/09/2014 02:23 PM, abhishek jamwal wrote: >> Dear All, >> >> I wish to generate electrostatics surface cartoon for a protein, >> which is a tetramer. >> >> I am using pdb to pqr server >> (http://nbcr-222.ucsd.edu/pdb2pqr_1.8/) to generate .pqr files as >> part of this process. >> >> I find that server is able to genetrate .pqr file contents, only >> when input pdb file contains a single chain (monomer), it is >> failing to do the same when I give it tetramer pdb co-ordinates, >> why is that ? and how can I generate a .pqr file for >> teramer...what other options do I have ? >> >> many thanks in adavnce >> >> abhishek >> > > -- Dr Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 > D-37077 Goettingen > > GPG Key ID = A46BEE1A > - -- - -- Dr Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.12 (GNU/Linux) iD8DBQFUiC8NUxlJ7aRr7hoRAtY7AKCUIXsmhaN864yMzEK+vtGIjfXN0ACfQY8x cE2Xo9VfQLF6DHc7ko8V1ls= =Jw4z -----END PGP SIGNATURE-----
