From: [email protected]
To: [email protected]
CC: [email protected]
Subject: rosie server, wrong plots? (off topic)
Date: Tue, 14 Apr 2015 22:07:21 +0000
Dear All,
Any one knows why the Rosie Server for protein docking (docking2) gave two
plots that seem not consistent with each other on the x-axis which is the
"RMSD". Or me please give some suggestion if I understand something wrong.
Please see the attached figure.
I know from the Rosie website that the clustering of lowest energy poses like
a funnel shape is a gold standard for success of identifying a potential
binding pocket. But not sure why the top 20 low energy poses show up
differently along the x-axis in the two plots, which kind of limits my
confidence in the usage of these results...). Thanks for any comments.
Best,ConanRice University
