How about cutting up the pdb file into the desired sections and using pisa on them?
JPK From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of Atul Kumar Sent: Monday, May 04, 2015 1:56 PM To: [email protected] Subject: [ccp4bb] calculation of ASA between two helices Hi all, I am trying to calculate accessible surface area between 2 helices from 2 different domains of protein. PISA gives me either total interface of the protein or per residue. Can anyone please suggest me what would be the best possible way to get it? Thanks and regards Atul
