All of the above started to work On Mon, Jun 29, 2015 at 2:27 AM, Harry Powell <[email protected]> wrote:
> Hi Ivan > > When you say "it started to work" do you mean xia2, imosflm & ccp4i, or > just one of these?? > > :-) > > On 29 Jun 2015, at 08:38, xaravich ivan wrote: > > Thanks Graeme, > I just uninstalled CCP4 and ccp4i Tcl, then re installed ccp4i tcl+tk > first and then CCP4+arpwARP and then it started to work finally. > I don't know why this would be the case, but for the timing it seems to > work. > > Thanks, > Ivan > > On Mon, Jun 29, 2015 at 12:07 AM, Graeme Winter <[email protected]> > wrote: > >> Dear Ivan >> >> This is not a xia2 error, rather something very unhappy with ccp4i - you >> should be getting this error from almost any ccp4i session? I expect more >> ccp4i expert people will be able to help here. >> >> It is also possible (indeed, easier) to run xia2 from the command line, >> for more information: >> >> http://xia2.sourceforge.net/using_xia2.html >> >> However this will not resolve your original iMosflm problem, which is the >> subject of the post (just responding to your ccp4i problem) >> >> Best wishes Graeme >> >> On Mon, Jun 29, 2015 at 12:26 AM xaravich ivan <[email protected]> >> wrote: >> >>> Thanks for your suggestion, Jurgen >>> I tried xia2 and tried it several times, turning the machine off, >>> rebooting, using different data sets, exiting ccp4i but every time it gives >>> this error msg.(attached) >>> >>> On Sun, Jun 28, 2015 at 2:16 PM, Jurgen Bosch <[email protected]> wrote: >>> >>>> Try xia2 from ccp4i and see if it also chokes. >>>> >>> Jürgen >>>> >>>> ...................... >>>> Jürgen Bosch >>>> Johns Hopkins University >>>> Bloomberg School of Public Health >>>> Department of Biochemistry & Molecular Biology >>>> Johns Hopkins Malaria Research Institute >>>> 615 North Wolfe Street, W8708 >>>> Baltimore, MD 21205 >>>> Office: +1-410-614-4742 >>>> Lab: +1-410-614-4894 >>>> Fax: +1-410-955-2926 >>>> http://lupo.jhsph.edu >>>> >>> >>>> On Jun 28, 2015, at 13:51, xaravich ivan <[email protected]> >>>> wrote: >>>> >>>> Thanks Jurgen, >>>> But there is no space in the last directory, I do not know where it is >>>> coming from. >>>> >>>> Its really making me crazy, because I have 0.95 Angs data of a long >>>> peptide, I wanted to solve it over the weekend!! >>>> I have no clue why this is happening >>>> Thanks for your suggestion! >>>> >>>> On Sun, Jun 28, 2015 at 9:51 AM, Jurgen Bosch <[email protected]> wrote: >>>> >>>>> do you have a space in the last directory 1-03/103 1 ? >>>>> That might be the reason it fails >>>>> Jürgen >>>>> ...................... >>>>> Jürgen Bosch >>>>> Johns Hopkins University >>>>> Bloomberg School of Public Health >>>>> Department of Biochemistry & Molecular Biology >>>>> Johns Hopkins Malaria Research Institute >>>>> 615 North Wolfe Street, W8708 >>>>> Baltimore, MD 21205 >>>>> Office: +1-410-614-4742 >>>>> Lab: +1-410-614-4894 >>>>> Fax: +1-410-955-2926 >>>>> http://lupo.jhsph.edu >>>>> >>>>> On Jun 28, 2015, at 12:47 PM, xaravich ivan <[email protected]> >>>>> wrote: >>>>> >>>>> Dear ccp4 users, >>>>> I am starting to solve a new structure after a long time and using my >>>>> Mac for the first time. As all the data has been downloaded remotely into >>>>> this mac, currently I am stuck using this machine. >>>>> Now I am trying to upload my images into CCP4i mosflm and getting >>>>> these errors.( attached screen shot) >>>>> >>>>> How do I fix this? >>>>> >>>>> Thanks in advance, >>>>> ivan >>>>> <Screen Shot 2015-06-28 at 9.43.09 AM.png><Screen Shot 2015-06-28 >>>>> at 9.42.16 AM.png> >>>>> >>>>> >>>>> >>>> > > Harry > -- > Dr Harry Powell, MRC Laboratory of Molecular Biology, Francis Crick > Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH > Chairman of International Union of Crystallography Commission on > Crystallographic Computing > Chairman of European Crystallographic Association SIG9 (Crystallographic > Computing) > > > > > > > > > > >
