Thanks for everybody's suggestions! I finally fixed coot following Zhijie's suggestion, where I set "one window" mode in Xlaunch. For pymol, I just gave up... I am not sure whether the NVIDIA graphic card is making things more complicated...
Best, Chen On Thu, Jul 2, 2015 at 1:29 AM, Zhijie Li <zhijie...@utoronto.ca> wrote: > Hi Chen, > > I followed instructions on this page and it seems to be working: > > http://www.geo.mtu.edu/geoschem/docs/putty_install.html > <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.geo.mtu.edu_geoschem_docs_putty-5Finstall.html&d=AwMFaQ&c=-dg2m7zWuuDZ0MUcV7Sdqw&r=uV9bK9zAIvRZlk7q6-YllA&m=xfQGepyCVehabnXteqeg61Xem6P7gGu-1ba56BOC5wc&s=cgZAn_6jKDjQ-qmii2I1r5svq0nA403oEVm7Mite95I&e=> > > One thing I think is worth mentioning is that in Putty-connection-SSH-X11, > I put localhost:0.0 instead of 10.0, as for putty itself, it is requesting > from Xming for the use of display 0.0. > > For COOT, it seems that I have to set Xlaunch in “one window” mode or > simply run Xming.exe. But still there is some issue with refreshing the > screen when choosing menu items. > > My systems are CentOS 6.6 and Windows 7/Putty0.60/Xming6.9.0.31. > > Zhijie > > > > *From:* Chen Zhao <c.z...@yale.edu> > *Sent:* Wednesday, July 01, 2015 7:05 PM > *To:* CCP4BB@JISCMAIL.AC.UK > *Subject:* Re: [ccp4bb] Coot and Pymol through SSH by Xming/PUTTY on a > windows client? > > Thank you Dale, but when I added " localhost:10.0" to X display > location, the problem still exist, just without the phrase "localhost:10.0" > in the warning. My X11 forwarding is enabled all the time and all other > GUIs work just fine. > > And thank you for your clarification on the concept of server and client > "in the X11 word". It makes a lot of sense and I just didn't give it a > second thought! > > Best, > Chen > > On Wed, Jul 1, 2015 at 6:47 PM, Dale Tronrud <de...@daletronrud.com> > wrote: > >> -----BEGIN PGP SIGNED MESSAGE----- >> Hash: SHA1 >> >> >> Both the ssh client and server must be set up with "X11Forwarding >> yes". The message sounds like your local computer is not set up to >> accept X11 tunneling. (By the way, in the X11 world the remote system >> is the "client" and your local system the "server".) >> >> Dale Tronrud >> >> On 7/1/2015 3:40 PM, Chen Zhao wrote: >> > Hi all, >> > >> > Sorry to bother you, but I am trying to fix a long-standing problem >> > that I cannot run Coot and Pymol through Xming/PUTTY by SSH >> > connection on a windows client. The error messages are pretty >> > similar for both: Coot: PuTTY X11 proxy: unable to connect to >> > forwarded X server: Network error: Connection refused >> > (coot-real:23113): Gtk-WARNING **: cannot open display: >> > localhost:10.0 Pymol: PuTTY X11 proxy: unable to connect to >> > forwarded X server: Network error: Connection refused freeglut >> > (pymol): failed to open display 'localhost:10.0' >> > >> > Does anybody have some ideas? >> > >> > Thank you so much, Chen >> -----BEGIN PGP SIGNATURE----- >> Version: GnuPG v2.0.22 (MingW32) >> >> iEYEARECAAYFAlWUbgYACgkQU5C0gGfAG10hVgCeLmuE4pHFrapu9biY9nHO/Bpi >> 5O8An17UN+hgpr7/6A+mny+XOBfJV/T5 >> =iTfz >> -----END PGP SIGNATURE----- >> > >
