Wont PISA do it? It sorts out the most likely biological unit for you after applying symmetry operators. Either submit your coordinates to the EBI PDB server or use the version in CCP4
Eleanor On 17 November 2016 at 19:57, chemocev marker <jirivit...@gmail.com> wrote: > Hi All > > I am interested to measure the symmetry axis of individual sub-unit (chain > A & chain B) along with the symmetry axis of the heterdimer (AB). Each > chain is also 2 fold axis, and I can measure by removing 1 chain and > measure for the other and then combine all the symmetry axis in the 1 PDB > file. Is there is a way to do it with out removing the either chain. > > I searched and there was a FIT program on the DOMOV server, which is not > active any more. > If there is some other programs that can do it. > > best > > Jiri > >
