Hi Paul and Clement, As suggested by the Paul, Export the map fragment from the COOT, did the trick. It worked perfectly fine.
Thank for valuable suggestions, indeed helpful. Appu On 28 February 2017 at 19:55, Appu kumar <appu.kum...@gmail.com> wrote: > Hi, > Yes I tried renaming the file to .map, .ccp4, .map.xplor. Nothing seems > to be making mesh in pymol around the corresponding atom. > > Thank you for help and time > Appu > > On 28 February 2017 at 19:38, Clement Angkawidjaja <clem...@evec.jp> > wrote: > >> Have you tried changing the file extension to .ccp4 instead of .map? >> >> Cheers, >> Clement >> >> *From:* Appu kumar <appu.kum...@gmail.com> >> *Sent:* Wednesday, March 01, 2017 7:54 AM >> *To:* CCP4BB@JISCMAIL.AC.UK >> *Subject:* Re: [ccp4bb] ANODE anomalous map in pymol >> >> Hi, >> I Already did that in COOT, but PYMOL does not read it in map format. >> Pymol fail to show mesh in isomesh command. >> Thank you >> >> Appu >> >> On 28 February 2017 at 16:31, Paul Emsley <pems...@mrc-lmb.cam.ac.uk> >> wrote: >> >>> On 28/02/2017 20:44, Appu kumar wrote: >>> >>>> Dear CCP4 Users, >>>> I ran anode to calculate the anomalous map for heavy atoms in protein. >>>> ANODE output the >>>> anomalous map in .pha file, which can be viewed in COOT. However, I >>>> want to get the >>>> anomalous map from .pha file to .map or .xplor file, which can be feed >>>> into PYMOL to make >>>> maps. Is there a way to extract the anomalous map information from .pha >>>> file to .map or >>>> .xplor file. >>>> >>> >>> In Coot: >>> >>> File -> Export Map >>> >> >> > >
