Yes that works. I need to stop following instructions….

Thx, BR

 

From: Robbie Joosten [mailto:[email protected]] On Behalf Of Robbie 
Joosten
Sent: Friday, May 26, 2017 13:38
To: Bernhard Rupp <[email protected]>; [email protected]
Subject: RE: [ccp4bb] BMA NAG FUC

 

Hi Bernhard,

 

We had the same problem recently and it looks like a bug. The workaround is to 
give it an alternative name the same as the name it should have. So FUC your 
FUC etc 😉

 

Cheers,

Robbie

 

 

 

Sent from my Windows 10 phone

 

Van: Bernhard Rupp <mailto:[email protected]> 
Verzonden: vrijdag 26 mei 2017 12:56
Aan: [email protected] <mailto:[email protected]> 
Onderwerp: [ccp4bb] BMA NAG FUC

 

Hi Fellows,

 

upon updating a deposition of a glycosylated model, I see no longer the option 
in the ligand page to

override the as incorrect flagged monomer assignments BMA NAG FUC etc. for 
glycan components. Instead, 

a mandatory mismatch correction is demanded. The suggestion of alternate 
identifiers, which was

present before is also missing, together with the override option). The 
validation still works fine.

 

Is this a new ‘feature’ or am I ignorant of a new policy? 

 

In principle I agree that using different monomer names for free monomer vs 
bound ones could be

useful – a residue is not a free amino acid, and data miners have no easy means 
to distinguish 

such. The same argument can be made for sugars as bona fide ligands vs 
component of a glycan.

 

Best, BR

 

------------------------------------------------------

Bernhard Rupp

CVMO

 <http://www.hofkristallamt.org/> http://www.hofkristallamt.org/

 <mailto:[email protected]> [email protected]

+1 925 209 7429

+43 676 571 0536

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