*Exascale Computational Crystallographer Postdoc, **Lawrence Berkeley
National Laboratory*



Berkeley Lab’s Molecular Biophysics & Integrated Bioimaging Division has an
opening for a postdoctoral fellow specializing in exascale crystallographic
computation.  Several factors are creating a need for this work.  The next
decade of structural biology at the Linac Coherent Light Source (LCLS) will
include groundbreaking advances in time domain protein crystallography,
diffuse scattering to observe dynamic motion, and single particle
diffraction.  These large datasets will be processed at exascale computers
designed and installed at supercomputer centers such as LBNL’s NERSC.



*What You Will Do:*

• Using our previously developed packages (DIALS and cctbx.xfel) as a
starting point, continue to develop and test software for X-ray
free-electron laser (XFEL) serial crystallography.

• Learn and understand the hardware available for exascale computing
(including Knights Landing compute cores and burst-buffer availability), so
code can be refactored for massively parallel execution.

• Work at the interface between supercomputer design teams, computer
science groups, LCLS beamline scientists, and X‑ray crystallography user
groups.

• Develop new algorithms to adapt to heterogeneous experimental designs.

• Deliver new features on time in support of structural biology.

• Publish at least one first-author peer-reviewed publication per year.

• Present at conferences, and continuously communicate results to several
collaborating groups.



*What is Required:*

• PhD in Biophysics, Bioinformatics, Mathematics, Computer Science,
Engineering or Physical Sciences.

• Familiarity with macromolecular crystallography, other structural biology
techniques, or image processing methods.

• Python and C++ both mandatory.

• Experience with modern object-oriented, version-controlled software
development, with a team-oriented approach.

• Excellent oral and written communication skills.

• Ability to work effectively as part of a cross-disciplinary team.

• Demonstrated ability to analyze complex problems with direct supervision,
develop strategies to solve specific problems, while running appropriate
controls to validate the correct results.



*The posting will remain open until the position is filled, however for
full consideration, please apply in the next two weeks (15 Sep 2017).*



*How To Apply*

Apply directly online at
https://lbl.taleo.net/careersection/2/jobdetail.ftl?lang=en&job=83897 and
follow the on-line instructions to complete the application process.

Nicholas K. Sauter, Ph. D.
Senior Scientist, Molecular Biophysics & Integrated Bioimaging Division
Lawrence Berkeley National Laboratory
1 Cyclotron Rd., Bldg. 33R0345
Berkeley, CA 94720
(510) 486-5713

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