The deposition interface has the following instructions on the file upload page.

     Coordinate upload instructions

 * Coordinate files should be deposited in mmCIF format if possible.
 * Phenix and Refmac support direct output of mmCIF files (please
   seewww.wwpdb.org/deposition/PDBxDeposit
   <https://www.wwpdb.org/deposition/PDBxDeposit>for instructions).
 * If your refinement software does not export mmCIF files we encourage
   you to usepdb_extract <http://pdb-extract.wwpdb.org/>to prepare an
   mmCIF formatted file.
 * If you use a PDB formatted coordinate file, please check the PDB
   format requirements prior to file upload as deviation from these
   format requirements may result in data loss.
 * Seewww.wwpdb.org/documentation/file-formats-and-the-pdb
   <https://www.wwpdb.org/documentation/file-formats-and-the-pdb>


I hope this helps.

John
PDBe

On 10/12/2017 21:13, Bernhard Rupp wrote:

> and you can feed it your other relevant log files ((E.g. From XDS, Aimless, Phaser and you refinement program).

Provided the fossil remembers where those are….

Cheers,

BR

Sent from my Windows 10 phone

------------------------------------------------------------------------

*From:* CCP4 bulletin board <[email protected] <mailto:[email protected]>> on behalf of Soisson, Stephen M <[email protected] <mailto:[email protected]>>
*Sent:* Sunday, December 10, 2017 9:58:09 PM
*To:* [email protected] <mailto:[email protected]>
*Subject:* Re: [ccp4bb] LINK vs LINKR

Hey now, I resemble that remark ;)

Sent from my iPhone


On Dec 10, 2017, at 3:53 PM, Bernhard Rupp <[email protected] <mailto:[email protected]>> wrote:

    or at least for the fossils still vi-ing PDB files…

    Thx, BR

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--
John Berrisford
PDBe
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD UK
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