Hi everyone,
I have a problem with Crank2 via ccp4i2. The program went through SHELXC/D but
it failed in Bp3 with error message as shown below. May I know what is the
problem?
Thanks for the help.
Best regards
HK
-ERROR- CTaskCrank2:0 Error in wrapper crank2 0.02::
The input objects for target MAD of Bp3 could not be retrieved
Traceback (most recent call last):
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/script/crank2_script.py",
line 439, in process
crank2 = ccp4i2crank.CallCrankFromCCP4i2(self, inpfile=inpfile,
defaults=defaults, rvapi_style=rvapi_style)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/ccp4i2crank.py",
line 28, in CallCrankFromCCP4i2
crank = parser.ParseAndRun(ccp4i2crank,defaults,rvapi_style=rvapi_style)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/parse.py",
line 56, in ParseAndRun
crank_prep.Run()
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/process.py",
line 939, in Run
self.RunBody(*args,**kwargs)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/manager.py",
line 140, in RunBody
self.RunSubProcess(p_run,ip)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/manager.py",
line 716, in RunSubProcess
ccp4i2crank.RegisterOutputToCCP4i2(p_run,error,nosuccess)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/manager.py",
line 705, in RunSubProcess
p_run.Run(from_ccp4i2=self.run.ccp4i2)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/process.py",
line 939, in Run
self.RunBody(*args,**kwargs)
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/processes/phas.py",
line 80, in RunBody
self.GetProg().Run()
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/program.py",
line 366, in Run
self.MergeMTZ( *self.CatchMTZObjects() )
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/program.py",
line 349, in CatchMTZObjects
self.TreatInput()
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/programs/bp3.py",
line 27, in TreatInput
common.Error('The input objects for target {0} of {1} could not be
retrieved'.format(exper,self.name))
File
"/home/mauricetam/Documents/software/ccp4-7.0/ccp4-7.0/share/ccp4i2/pipelines/crank2/crank2/common.py",
line 34, in Error
raise CrankError(message)
CrankError: The input objects for target MAD of Bp3 could not be retrieved
