There are 
NAG-SER, NAG-THR
 links in the monomer library. I do not know if you are looking for these links.

If you need any other link you can use AceDRG to generate them.

Regards
Garib



> On 23 Jul 2018, at 23:07, Goran Bajic <[email protected]> wrote:
> 
> Hi all,
> 
> I may have an O-linked glycan in one of my structures and I was wondering if 
> someone has any experience building these? I think COOT only handles N-linked 
> glycans.
> 
> Thanks,
> Goran
> 
> 
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