Well, I don't know if that is the newest appropriate piece of software, but pdbsum does automatic calculation of clefts using MOLE I think. It does provide jmol and rasmol scripts and volume and surface calculations.
Cheers Christian On Thu, Apr 4, 2019 at 8:24 AM Fred Vellieux <[email protected]> wrote: > Hi CCP4BBers, > > With software constantly changing, new versions arriving to us and new > software reaching the intended audience, I am looking for the most > appropriate piece(s) of software to compute the volume of active site > "cavities" in related 3D structures. > > I have tried to use Voidoo however I do not know where to download an > initial (and fairly comprehensive) cavity.lib file which I'd modify if > need be. The links on the USF web site appear to be broken. > > I am running Linux. > > Thanks for the advice, > > Fred. Vellieux > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
