Dear Careina,

I would recommend you our partner-specific binding site predictor: BIPSPI, that uses as input 2 sequences or 2 pdb files and proposes the binding site of the two partners.

http://bipspi.cnb.csic.es/xgbPredApp/

Kind regards,

Ruben


Quoting "[email protected]" <[email protected]>:

Dear allApologies for off topic question but can anyone recommend good programs for identifying docking interfaces between two proteins. I do not know that these two proteins interact. I would like a level of confidence on a possible interaction. is there a good program to do this?kind regardsCareina

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--- Begin Message ---
Dear Careina,

I would recommend you our partner-specific binding site predictor: BIPSPI, that uses as input 2 sequences or 2 pdb files and proposes the binding site of the two partners.

http://bipspi.cnb.csic.es/xgbPredApp/

Kind regards,

Ruben


Quoting "[email protected]" <[email protected]>:

Dear allApologies for off topic question but can anyone recommend good programs for identifying docking interfaces between two proteins. I do not know that these two proteins interact. I would like a level of confidence on a possible interaction. is there a good program to do this?kind regardsCareina

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https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1



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