Well - you can see two maps overlapped in coot if the coordinates of protein A and B can be overlapped. Read in cords a and map a, coordinated b and map b. Then match b to a and the map b can be shifted by the same matrix. Then you can scroll each map as you wish...
On Tue, 12 May 2020 at 07:31, Alexandre Ourjoumtsev < alexander.ourjoumt...@univ-lorraine.fr> wrote: > Dear Murpholino, > > there is a couple of articles addressing specifically this issue : > > Urzhumtsev, A., Afonine, P.V., Lunin, V.Y., Terwilliger, T.C., Adams, P.D. > (2014) "Metrics for comparison of crystallographic maps". *Acta Cryst., * > *D70**, *2593-2606 > Urzhumtseva, L., Urzhumtsev, A. (2016) "COMPaRS: stand-alone program for > map comparison using quantile rang scaling". *J. Appl.Cryst., **49*, > 2270-2275. > > Best regards, > > Sacha Urzhumtsev > > > ----- Le 12 Mai 20, à 0:18, Murpholino Peligro <murpholi...@gmail.com> a > écrit : > > I want to compare electron density features of map A from protein A and > map B from protein B... > > Because each map has a different rmsd level... > > ...what is the best way to compare electron density between maps? > > Is there a way to normalize maps or something like that? > > Thanks > > ------------------------------ > > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
