Hi all, I want to build a ligand that does not exist in reality (or be able to modify an existing ligand as per choice). 1. JLigand in the ccp4 suite seems to work only on java and gives me an “configuration problem” as an error message on my Windows. I am new to this and unaware of how to solve this issue. Could I get some suggestions on how to start this? 2. Alternatively, I was trying to use eLBOW from phenix but it seems to only build ligands but unable to delete atoms. Is there another program or option for me to delete sections of the ligand and geometrical optimise them in phenix? ThanksHari
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