A further note on assembly search: since April the RCSB PDB offers structure search for assemblies. See the "Structure Similarity" section in https://www.rcsb.org/search/advanced. This works only for PDB-deposited structures but we are working on making it available for 3D coordinates submitted by users. The search is extremely fast (below a second) and it will match the assembly globally. Additionally the search results can be further filtered by other criteria such as resolution or organism.
The search is also available at Structure Summary Pages (e.g. https://www.rcsb.org/structure/4HHB) with the "Find Similar Assemblies" link below the symmetry information on top left. Jose On Sun, 21 Jun 2020 at 07:58, Andrew Lovering <a.lover...@bham.ac.uk> wrote: > Dear All > > > Many thanks to Johann for the suggestion of Topsearch - rather pleasingly > our tetramer is novel in the tetrameric arrangement, but each of the dimers > has its DNA recognition helices in agreement with several hits 😊a win > all round > > > Bringing joy to my lockdown. > > > Best > > Andy > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
