*        Application link:

*        
https://sanofi.wd3.myworkdayjobs.com/SanofiCareers/job/Framingham-MA/Computational-Biology-Scientist--Machine-Learning-in-Large-Molecule-Research_R2561961

*

*        About the Company:

Every day, Sanofi's 100,000 employees are committed to improve the lives of 
people around the world, with sustainable and responsible solutions and 
initiatives. Sanofi is recognized as one of the leading biopharmaceutical 
companies in the world and is pioneering innovation in biologics with the first 
approved nanobody drug, the first clinical stage tri-specific antibody, and a 
novel genetic codon expansion platform for new engineering capabilities. 
Details of the organization and the company's mission and goals can be found on 
our website (http://www.sanofi.us/l/us/en/index.jsp).

Overview:

Sanofi Large Molecule Research Platform is opening a new scientist/senior 
scientist role to seek a computational biologist with strong expertise in 
computational biology, bioinformatics, artificial intelligence (AI), machine 
learning (ML), and deep learning (DL).  The successful candidate will work in 
an interdisciplinary team to apply cutting-edge computation, AI/ML/DL, and 
structural biology technologies to resolve challenges in real-world drug 
discovery and make impacts to patients' life. This is an exciting opportunity 
to contribute to the process of design and engineering revolutionary biologics, 
including multivalent, multi-targeting molecules by leveraging proprietary data 
coming from our industry-leading high-throughput automation platforms. The 
successful candidate will gain deeper insight into drug development process and 
transform AI/ML algorithms into accelerating biologics discovery and 
development process.

Your responsibilities include:

o   Evaluate and develop state-of-the-art computational methods to decode 
biophysical and geometrical features from antibody-antigen datasets and create 
predictive models for engineering.

o   Develop and apply complex machine/deep learning solutions to our 
high-content and high-quality proprietary datasets, as well as public datasets.

o   Perform data querying and feature extraction to improve current workflow 
for antibody/nanobody engineering, including affinity modification, 
cross-reactivity engineering, liability risk prediction and mitigation, 
multi-specific antibody engineering, and de novo antibody design.

o   Maintain a keen awareness of recent developments in data science, 
bioinformatics, and state-of-the-art of AI/ML/DL algorithms, aiming to 
accelerate development of new computational algorithms.

o   Effectively collaborate with colleagues with diverse scientific background, 
identify problems and opportunities, combine computational and structural 
analysis to support large molecule projects.

Basic qualifications:

o   MS with 5+ years' or Ph. D. with 0-5 years' experience in computational 
structural biology, bioinformatics, computational chemistry, or computational 
physics, with significant experience in data science and machine learning.

o   Understanding of protein structure and protein-protein interaction. 
Hands-on experience with structural analysis and optimization of biochemical 
and biophysical properties, like thermodynamics, with protein design tools e.g. 
Rosetta, BioLuminate, or MOE, etc.

o   Strong familiarity with core concepts in Deep Learning and Neural Networks 
including CNNs, RNNs, Embeddings, Transfer Learning, Attention-based Networks, 
Statistical Learning.

o   Familiarity with deep learning libraries such as Keras, TensorFlow, 
PyTorch, and bioinformatics pipelines

o   Experience of developing computational prediction models for protein 
engineering through programming with Python, Shell, or SVL, etc.  Experience 
with cloud computing, parallel computing, and/or supercomputing is expected.

o   Familiarity with protein structure or sequence featurization and learned 
embeddings. Experience with database mining, big data, and large-scale virtual 
screening using Bayesian optimization etc is desired.

o   Familiarity with Data Visualization tools/libraries and dimensionality 
reduction algorithms.

Preferred qualifications:

o   Understanding of biologics R&D process is a plus.

Sanofi Inc. and its U.S. affiliates are Equal Opportunity and Affirmative 
Action employers committed to a culturally diverse workforce. All qualified 
applicants will receive consideration for employment without regard to race; 
color; creed; religion; national origin; age; ancestry; nationality; marital, 
domestic partnership or civil union status; sex, gender, gender identity or 
expression; affectional or sexual orientation; disability; veteran or military 
status or liability for military status; domestic violence victim status; 
atypical cellular or blood trait; genetic information (including the refusal to 
submit to genetic testing) or any other characteristic protected by law.

#GD-SA

#LI-SA

At Sanofi diversity and inclusion is foundational to how we operate and 
embedded in our Core Values. We recognize to truly tap into the richness 
diversity brings we must lead with inclusion and have a workplace where those 
differences can thrive and be leveraged to empower the lives of our colleagues, 
patients and customers. We respect and celebrate the diversity of our people, 
their backgrounds and experiences and provide equal opportunity for all.

Thanks,
Yu Qiu
Principal Scientist, Protein Engineering, Biologics Research
TEL.: (+1)508-270-2555
49 New York Avenue - Framingham, MA 01701 - USA
[cid:[email protected]]

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