Sorry - go back to CCP4i Under maps Calculate patterson ( diff - anom - native - whatever. Click polt harker sections
Oh dear That is meant to produce a postscript file but on my new Mac - it doesnt work.. On Sat, 10 Oct 2020 at 16:24, Mooers, Blaine H.M. (HSC) < [email protected]> wrote: > Hi Gloria, > > The lack of repsonse to your question sadly suggests that not many people > have made a Harker section recently. > > You could probably make a fancier plot with matplotlib in Pytbon or > Gnuplot, but > I use Map Slicer under the Visuallization pulldown in the ccp4i gui to > make old-fashion contour plots of Harker sections. > > You have to play around with the scale and and other settings to get what > you need, especially if you have a > unit cell angles that not equal to 90 degrees. In such a case, you may > have to spend an hour tweaking these parameters. > If you can live with a bitmap image of the map, you can always take a > snapshot of the image in the gui, which is > not always replicated completely in the exported postscript file. If > needed, you can also edit the postscript file in a text editor. > > Best regards, > > Blaine > > Blaine Mooers, Ph.D. > Associate Professor > Department of Biochemistry and Molecular Biology > College of Medicine > University of Oklahoma Health Sciences Center > S.L. Young Biomedical Research Center (BRC) Rm. 466 > 975 NE 10th Street, BRC 466 > Oklahoma City, OK 73104-5419 > > ________________________________________ > From: CCP4 bulletin board [[email protected]] on behalf of Gloria > Borgstahl [[email protected]] > Sent: Thursday, October 08, 2020 4:21 PM > To: [email protected] > Subject: [EXTERNAL] [ccp4bb] Contouring Patterson map? > > What is the best way to display Harker sections... these days? > > ________________________________ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1< > https://urldefense.proofpoint.com/v2/url?u=https-3A__www.jiscmail.ac.uk_cgi-2Dbin_WA-2DJISC.exe-3FSUBED1-3DCCP4BB-26A-3D1&d=DwMBaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=qf1Jq5ykHF9fzngXaWeNGRkB1vNwHE1ok-J03SkgEVw&s=rwG7QDb4VqJ-bZvrEi5dYdDIjYVz8a1aRcm-dlhrKYw&e= > > > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a > mailing list hosted by www.jiscmail.ac.uk, terms & conditions are > available at https://www.jiscmail.ac.uk/policyandsecurity/ > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
