Hi Wajahat, first off, there is a dedicated mailing list for Phenix specific questions ( http://phenix-online.org/).
You need to run more than one refinement cycle before you try making sense of R factors. Pavel On Wed, Jan 20, 2021 at 10:05 AM Wajahat ali khan <wjt.ali.k...@gmail.com> wrote: > Dear all, > > > I have just started with X-ray diffraction. > I would appreciate any ideas as to why after one cycle of phenix.refine , > the Rfree value increased for my ligand fitted model molecular replacement > solution model. > > Thanks > > Wajahat > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a > mailing list hosted by www.jiscmail.ac.uk, terms & conditions are > available at https://www.jiscmail.ac.uk/policyandsecurity/ > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/