Remember, the program may be writing files to some partition other than the one your current working directly is located. Maybe /tmp, for example.

Dale Tronrud

On 2/2/2021 12:36 PM, Amit Singh wrote:
Dear Abhilasha, It seems that the partition where you are running your simulation has no more space left. Kindly check the availability of space in the hard disk, especially in the working partition of the disk.

On Tue, 2 Feb 2021 at 9:29 PM, Abhilasha Thakur <[email protected] <mailto:[email protected]>> wrote:

    Hii..

    I have downloaded the NAMD and VMD software, during my MD simulation
    the first half is run smoothly (4/10 ns) but the process gets
    stopped in between not only this but VMD also not working when I see
    the MD simulation results. I have run this system in two different
    systems, one is Windows; Dell, 32GB RAM icore 7  have version namd
    2.14  with 10 core processor and second is DGX2 having 16 GPU having
    Nvidia CUDA version NAMD 3.0 and protein total atoms is 5650. Please
    suggest to me why this happens and what I can do to solve this problem.
    I have attached a sample image of the error below.
    Attachments area


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with regards
Amit Singh

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