Hello everyone,

While this is not exactly a crystallography question, I do think that most
of you are well versed in structural analysis.
The problem: I have a very large number of ligands (>100.000) resulting
from blind docking against a certain receptor. Due to the large number,
this can not be done visually.
Is there a way to cluster these ligands based on their positions, so that
we can observe potential binding sites?

Any insight would be greatly appreciated!

Cheers!

S

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