Dear Sam, if you want to add hydrogens on "riding" positions in the same way that Refmac adds them, here is a command that aims to do exactly the same thing:
gemmi h 1cdw.pdb output.pdb Otherwise, a program called reduce from MolProbity (distributed with both Phenix and CCP4) is probably the most popular one for adding hydrogens. I don't know if there are any newer and better programs than reduce as of today. Best, Marcin On Wed, 29 Sept 2021 at 13:04, Sam Tang <[email protected]> wrote: > Dear community > > This may appear to be a silly question -- I am trying to add hydrogens to > the structure in PDB 1CDW. My initial thought is to run a single run of > refinement with a refinement program. It happens that I cannot locate the > map coefficients under the entry (am I missing something?) So... is there > an easy way to do what I want in this case? > > Warm regards > > Sam > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
