Amazing Charles - it now worked.

I don't know how it came around but I got suspicious about the state of the
computer when a new pymol download won't launch properly either. So I gave
the computer a reboot.

Now it seems that the pymol is up and running, so is the CCP4 compilation.
I just checked, the CCP4i and coot are now running as expected.

I really would like to copy the whole BB to express my gratitude - kudos,
Charles, -yong

Yong Tang, Ph.D.
Director, Structure Biology
ENSEM Therapeutics
200 Boston Ave, Suite 1875
Medford, MA 02155
yong.t...@ensemtx.com

 P.S. I followed this link below:
>
>
>
> https://kpwulab.com/2021/05/25/install-ccp4-on-mac/
>
>
>
> 1.      Download CCP4 mac version <http://www.ccp4.ac.uk/download/#os=mac> 
> from
> official site, I prefer getting the full package (1.5-1.7 GB, depends).
>
> 2.      Click and unpack the CCP4 packages
>
> 3.      move the CCP4 package to proper location. For example, move to
> /Applications/Science (Science is the folder I created for my own work
> apps).
>
> 4.      Turn on XQuartz <https://www.xquartz.org/> (install this one
> first), have a terminal open, go to the /Applications/Science/CCP4 in the
> terminal
>
> 5.      *sudo xattr –rc /Applications/ccp4-7.1*
>
> 6.      Run BINARY.setup (ie. sudo ./BINARY.setup). It takes few minutes
> to compile and install scripts.
>
> 7.      After step 5, source the CCP4 setup script. I use tcsh
> source bin/ccp4-setup.csh
>
> 8.      type ccp4i or coot to see if the programs open without any error.
>
> 9.      Add the setup script in tcshrc for connivence
> vi .tcshrc –> add: source /Applications/Science/CCP4/bin/ccp4-setup.csh
>
> 10.  reopen XQuartz. CCP4 should be ready for use.
>
>
>
> On Thu, Sep 30, 2021 at 5:10 AM Charles Ballard - STFC UKRI <
> charles.ball...@stfc.ac.uk> wrote:
>
> Hi Yong
>
>
>
> What I normally do is
>
>
>
> sudo xattr –rc /Applications/ccp4-7.1
>
>
>
> getting rid of the extended attributes seems to fix
>
>
>
> Charles
>
>
>
> *From:* CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> *On Behalf Of *Yong
> Tang
> *Sent:* 29 September 2021 22:17
> *To:* ccp4bb <ccp4bb@jiscmail.ac.uk>
> *Subject:* [ccp4bb] Security blockage: CCP4 installation on macOS Big Sur
>
>
>
> Dear all,
>
> I downloaded the latest mac version of CCP4 suite for installation on a
> new Mac (macOS Big Sur Version 11.5.2). The package was downloaded using
> Chrome. After unpacking and moving the folder to its destination
> /Applications/ccp4-7.1, the set up using
>
> ./BINARY.setup
>
> gives error messages that the app was downloaded via Chrome and that
> "macOS cannot verify that this app is free from malware".
>
> I tried using "sudo" but that didn't help.
>
> Do you have a quick pointer for me?
>
> Many thanks, -yong
>
>

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