https://pymolwiki.org/index.php/Rms_cur

On Fri, Nov 12, 2021, 9:05 AM Kyle Gregory <
[email protected]> wrote:

> Dear CCP4 bulletin board,
>
> I was wondering if there are any tools to determine the RMSD of the entire
> molecule (two domains) when only aligning one domain, the point i'm trying
> to make is a variation in domain positioning relative to one another but
> I'd like to quantify it. LSQ alignment in coot reports RMSD for the aligned
> porition only, as does the alignment tools on ccp4 cloud (unless i've
> missed a feature)
>
> Any advice would be greatly appreciated.
>
> Kind regards,
> Kyle
>
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