Or, you can start Coot in the terminal. Little CueMol gives the same info. Sent from ProtonMail mobile
-------- Original Message -------- On 14 Nov 2021, 07:24, Eleanor Dodson wrote: > Well I do this by overlapping one domain of protein A onto protein B - you > can do that in coot - then overlap the second domain of the shifted A onto > the second domain of B. The coot log file tells you omega phi kappa applied > and kappa is your angle of interest... is that clear enough - I could give > more detail.. > The worst problem is finding the coot log file but if you are using I2 it is > available in the job directory.. > Eleanor > On Fri, 12 Nov 2021 at 19:37, Ishan Rathore <ishanrathor...@gmail.com> wrote: > >> Hi Kyle >> >> I have used this pymol plugin to measure the angle between domains >> >> https://pymolwiki.org/index.php/Angle_between_domains >> >> Regards >> Ishan >> >> On Sat, Nov 13, 2021, 12:35 AM Kyle Gregory >> <00003632e92fcc15-dmarc-requ...@jiscmail.ac.uk> wrote: >> >>> Dear CCP4 bulletin board, >>> >>> I have two domains connected by a helix and I want to measure tilt angles >>> between domains, for comparison purposes to other structures of the same >>> protein. >>> >>> Does anyone have any tools they'd recommend? >>> >>> Kind regards, >>> Kyle >>> >>> --------------------------------------------------------------- >>> >>> To unsubscribe from the CCP4BB list, click the following link: >>> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 >> >> --------------------------------------------------------------- >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > --------------------------------------------------------------- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
