Dear Julian

I don't know about ContaMiner, but you might also try SIMBAD for contaminant 
detection

https://simbad.readthedocs.io/en/latest/


It's available at the command line, through i2 and Cloud interfaces, and at the 
CCP4 Online server

https://ccp4online.ccp4.ac.uk/ccp4online/


Dan


Prof Daniel Rigden  (He/Him)
Department of Biochemistry and Systems Biology
Institute of Systems, Molecular and Integrative Biology
Room 101, Biosciences Building
University of Liverpool
Crown St., Liverpool, L69 7ZB

(+44) 151 795 4467
www.liverpool.ac.uk/integrative-biology/staff/daniel-rigden/


________________________________
From: CCP4 bulletin board <[email protected]> on behalf of Julian Nomme 
<[email protected]>
Sent: 04 December 2021 18:17:12
To: [email protected]
Subject: [ccp4bb] ContaMiner server down?

Hi all,

I sent several jobs on the ContaMiner web server more than a week ago.
My jobs have been submitted but for some reason, as of today they are
still not running.
I tried to download the software and run it on my computer but I only
get an error message telling me that something went wrong.

Does anyone know if there is a current known problem or if it has been
discontinued?

Thanks,

Julian

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