Dear CCP4 people,

Refining a 1.7 Angstroem structure with REFMAC (CCP4i2) using hydrogens during 
refinements by generating riding hydrogens I obtain a PDB file that does not 
contain H atoms. However, the corresponding mmcif file that I should use for 
deposition contains their coordinates and give them either full or zero 
occupancy. Do you know how I can safely delete H atoms from the mmcif file 
prior deposition? Would this affect Rwork and Rfree calculated upon validation 
on the wwPDB?

Thanks in advance,

Luca Mazzei


Luca Mazzei - PhD
Laboratory of Bioinorganic Chemistry
Department of Pharmacy and Biotechnology (FaBiT)
Alma Mater Studiorum - University of Bologna
Viale Giuseppe Fanin, 40 - 40127, Bologna - Italy
Tel: +39 0512096235





########################################################################

To unsubscribe from the CCP4BB list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1

This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list 
hosted by www.jiscmail.ac.uk, terms & conditions are available at 
https://www.jiscmail.ac.uk/policyandsecurity/

Reply via email to