Did you make the original deposition ? If so the pdb accepts
re-depositions...

If it was done by someone else I guess the courteous thing is to notify
them and maybe talk to the pdb- redo team?
Cheers Eleanor

On Sat, 27 Jan 2024 at 01:53, Lucas Souza <[email protected]>
wrote:

> Dear all,
>
> After auditing and reprocessing a deposited structure with clear
> processing mistakes (missing/wrong residues and ligands with evident
> density) prior to some analysis that are going to be published, what should
> be done? Re-deposit the structure with a "reprocess" flag? Reopen the PDB
> deposition and update the files? Or simply state in the publication that
> the data was reprocessed?
>
> I'm curious if there's a consensus on handling situations of this nature.
>
> Cheers,
> Lucas
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