Hi Manohar, I dont have scripts to achieve this but, essentially, you would 1. Read in the coords 2. Fit a circle/ellipse to the coords. 3. Determine the curvature coeff which would 1/r (where r is the radius and should be output from step 2).
HTH, Best, Pranav -- Pranav Shah Postdoctoral Research Fellow. Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford OX3 7BN, UK On Sat, 30 Mar 2024 at 16:28, manohar r <[email protected]> wrote: > Dear Community, > > We have a protein-DNA complex coordinate file and are looking for your > help to find the curvature of a DNA duplex - bending angle. Can anyone > please help us to determine the curvature of the DNA who have done the > analysis earlier, that would be more helpful. > > Sincerely, > Manohar Radhakrishnan > Indiana University School of Medicine. > > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
