On 25/04/2024 16:07, Simon Vecchioni wrote:
--
Paul,
Many thanks for fixing the [simple mutate] button for DNA in
v1.1.08--works like a charm!
I would ask about two other DNA features--
1) The [add terminal residue] button seems unresponsive for DNA,
I see what you mean. From the terminal output it seems to want to try to
add a residue via a peptide bond.
I have made a note of this bug.
and is often quite useful;
OK.
2) There was a button chain in v0.8.9 to add base pair restraints,
Calculate--Modules--Restraints, and then Restraints--DNA-Bform. Is
this still present but moved? I haven't been able to dig this one out.
That code didn't make the transition. The whole module needs to be
reworked, I see now.
OK, well I will do that.
My intention was that base pairing restraints should be applied
automatically now. While RSR (Sphere, say) is active, give an atom in a
DG a little tug in the opposite direction to the DC - if the DC follows
then the base pair restraints are being applied (it would seem to me).
Paul
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