Hello,

ou should try refinement of anisotropic temperature factors.

Wim


Le 05/09/2025 à 11:39, Catherine Back a écrit :
Good morning,

I am currently solving a structure containing four heme b molecules (res 1.7 Å), each coordinated by two histidines. The refinement is looking good, but the output from refinement has marked the Fe ions of each heme with positive density (green) in the FoFc difference map - see image. Any ideas why? I used the Monomer Library in Coot to add hemes ('HEM') in. Is it something to do with the oxidation state of the Fe? And if so, is there anything I can do about it?

Best wishes,
Catherine

Dr Catherine R. Back (she/her)

Senior Post-doctoral Research Associate

School of Biochemistry

University of Bristol

UK




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