On Sunday 05 February 2006 00:12, Bala B K wrote:
> I wanted to add a new valency type for carbon namely carbonium
> ion. This is a carbon with 5 bonds and a positive charge. Is it
> possible to do this in CDK?

Yes. You can add this to the data file:

src/org/openscience/cdk/config/data/hybridization_atomtypes.xml

And make sure to use the IValencyChecker that uses this file.

Egon

-- 
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PhD student on Molecular Representation in Chemometrics
Radboud University Nijmegen
Blog: http://chem-bla-ics.blogspot.com/
http://www.cac.science.ru.nl/people/egonw/
GPG: 1024D/D6336BA6


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