Hi Thomas, Thanks a lot for the same.Finally got this jar and got to execute the CDK web services in Taverna.
Also any clue about where i could find the source code for these services? Thanks again Smitha --- Thomas Kuhn <[EMAIL PROTECTED]> wrote: > Hi Smitha, > > I just uploaded a new release of the cdk-taverna. > The filename is: > cdk-taverna-V0.1.1.jar and it should be available on > the following link: > > http://sourceforge.net/project/showfiles.php?group_id=20024 > > I hope this one works! > > Thomas > > > -----Ursprüngliche Nachricht----- > > Von: [EMAIL PROTECTED] > [mailto:cdk-user- > > [EMAIL PROTECTED] Im Auftrag von Smitha > Ajay > > Gesendet: Samstag, 25. März 2006 22:41 > > An: [EMAIL PROTECTED]; Thomas Kuhn > > Cc: [email protected]; > [EMAIL PROTECTED]; > > 'Smitha Ajay' > > Betreff: Re: AW: AW: [Cdk-user] CDK and Taverna > > > > Hi Nik, > > > > I had the old jar files of course and took the > latest > > cdk and cdk-taverna files from the other site that > you > > had pointed me to. > > > > But now the CDK WSDL's do not appear at all when > i > > start up Taverna. > > > > No clue why.However, the latest files were zip > files > > and not jar files ...would that matter?I tried > > renaming them to jar files but no luck. > > > > Any help? > > > > Thanks > > Smitha > > > > --- [EMAIL PROTECTED] wrote: > > > > > Hi Smitha, > > > > > > just to make sure that you are getting files > from > > > the right directories > > > ... > > > > > > Did you download the files from: > > > > > > > > > http://sourceforge.net/project/showfiles.php?group_id=20024&package_id=166 > > 755 > > > > > > or from: > > > > > > > > > http://cvs.sourceforge.net/viewcvs.py/cdk/cdk-taverna/ > > > > > > Make sure that you are using the second > possibility, > > > otherwise you will > > > not be working with the latest files ... > > > > > > Best, > > > Nik > > > > > > > > > > > > > > > > > > > > > "Thomas Kuhn" <[EMAIL PROTECTED]> > > > Sent by: [EMAIL PROTECTED] > > > 24.03.2006 08:45 > > > > > > > > > To: "'Smitha Ajay'" > > > <[EMAIL PROTECTED]> > > > cc: > <[email protected]>, > > > (bcc: Nikolaus Stiefl/PH/Novartis) > > > Subject: AW: AW: [Cdk-user] CDK > and > > > Taverna > > > Category: > > > > > > > > > > > > Hi Smitha, > > > > > > I think there are problems with the different > > > versions of the cdk and > > > cdk-taverna. > > > The best thing I would predict is to wait until > > > Monday, because I will > > > release a new CDK-Taverna version than. And > > > hopefully this will work! > > > > > > Only for information, what version of Taverna do > you > > > use and what Java > > > version? > > > > > > Cheers, > > > Thomas > > > > > > > -----Ursprüngliche Nachricht----- > > > > Von: [EMAIL PROTECTED] > > > [mailto:cdk-user- > > > > [EMAIL PROTECTED] Im Auftrag von > Smitha > > > Ajay > > > > Gesendet: Donnerstag, 23. März 2006 14:37 > > > > An: [email protected] > > > > Betreff: Re: AW: [Cdk-user] CDK and Taverna > > > > > > > > Hi Thomas, > > > > > > > > 1)I use Windows XP > > > > 2)I did delete jmol.jar and have copied the > cdk > > > jar > > > > file as well into the Taverna lib directory > > > > 3)I downloaded the latest cdk-taverna.jar from > the > > > cdk > > > > web site. > > > > > > > > Any ideas why it may still not be working? > > > > > > > > Thanks again > > > > Smitha > > > > > > > > --- Thomas Kuhn <[EMAIL PROTECTED]> wrote: > > > > > > > > > Hallo Smitha, > > > > > > > > > > which OS do you use? If you try to run it > under > > > > > linux delete the jmol.jar > > > > > within the lib directory of your Taverna > > > > > installation. This causes an > > > > > unsolved problem with the cdk because the > cdk > > > > > includes jmol too. > > > > > Which java version do you have installed? > > > > > Did you also copy the cdk.jar into the lib > > > > > directory? > > > > > From where did you download the > cdk-taverna.jar? > > > > > > > > > > Thomas > > > > > > > > > > > -----Ursprüngliche Nachricht----- > > > > > > Von: [EMAIL PROTECTED] > > > > > [mailto:cdk-user- > > > > > > [EMAIL PROTECTED] Im Auftrag > von > > > Smitha > > > > > Ajay > > > > > > Gesendet: Donnerstag, 23. März 2006 00:02 > > > > > > An: [email protected] > > > > > > Betreff: [Cdk-user] CDK and Taverna > > > > > > > > > > > > I am trying to use the CDK web services > > > provided > > > > > by > > > > > > cdk-taverna.jar in Taverna. > > > > > > > > > > > > I added the jar file in T averna lib and > got > > > the > > > > > list > > > > > > of WSDLs in Taverna. > > > > > > > > > > > > However when i tried to invoke any of > those > > > web > > > > > > services i get an error. > > > > > > > > > > > > For instance i tried the 'parseSMILES' and > > > gave a > > > > > > smile file as input and when i ran the > > > workflow, i > > > > > got > > > > > > an error in SmilesTOoks.parseSMILES() : > line > > > 49... > > > > > > > > > > > > Any clue as to how to make these run > === message truncated === __________________________________________________ Do You Yahoo!? Tired of spam? Yahoo! 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