On Sun, 2006-07-09 at 19:52 +0530, Om wrote:
> Hi,
>  
> I have been (unsuccessfully) trying to compile 'simplemcss.java'
> available from the http://blue.chem.psu.edu/%7Erajarshi/code/java/. 
>  
> I am using recent version of cdk src from svn and complied using 'ant
> clean dist-large' and JDK 1.5. 
>  
> I have checked in the recent SVN API. The Render2DModel does not have
> setHighlightColor() method. What is the equivalent method for this in
> the recent version of the cdk form svn.

As far as I can see, replace the above method call with a call to 
setSelectedPartColor. So it should read

r2dm.setSelectedPartColor(Color.blue);

Also, the call to paint requires an additional argument of true:

renderer.paintMolecule(this.haystack, (Graphics2D)g, false, true)

With these changes it will work.

I've update the code on the webpage

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