On Tuesday 26 December 2006 11:07, phanirao palivela wrote: > Tx for giving previous response.....based on that i successfully > compiled a cdk related program named EventCMLDemo.java > the output is as follows....... > > F:\cdk-source\build>java EventCMLDemo cu.cml > Processing cu.cml.... .succeeded!
Normally, this should have stated something like this too: " 50 atoms processed" That is, if you have many molecules, or one rather large one; specifically, this is outputed after each one molecule if 50 or more atoms new atoms are found... Each processed molecule is indicated by a '.'... therefore, I can see that your cu.cml has one molecule. > Actually we dont know wt is the output of this program....but we > successfully executed the program...i wnt to know the exact output of this > program.... and its use... Check the source code: 1. the frameRead() method in the inner IReaderListener class does the atom counting and printing the '.' for each molecule 2. the process(String ifilename) takes each command line option as file name and tries to read it with the CMLMolReadListener. This CMLMolReadListener is the CML equivalent of the IteratingMDLReader, and will pass around IAtomContainer's one by one, much like the IteratingMDLReader. This allows you to process CML files with millions of molecules, without necessarily running into OutOfMemory problems. I hope this helps, Egon -- [EMAIL PROTECTED] Cologne University Bioinformatics Center (CUBIC) Blog: http://chem-bla-ics.blogspot.com/ GPG: 1024D/D6336BA6 ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys - and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ Cdk-user mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/cdk-user
