On Wednesday 05 September 2007 19:19:54 you wrote:
> On Sep 5, 2007, at 1:08 PM, Stefan Kuhn wrote:
> > On Wednesday 05 September 2007 18:24:20 Rajarshi Guha wrote:
> >> Hi, are there plans to allow 2D depiction with correct
> >> steroechemistry? As an example  F/C=C\F and  F/C=C/F both get
> >> depicted as trans
> >
> > This is only true for formats without coordinates like smiles.
>
> But even if I were to supply a structure with 3D coordinates in the
> correct stereochemistry, doesn't the SDG generate 2D coordinates from
> scratch? And hence would ignore the supplied 3D coordinates /
> stereochemistry?
The sdg yes, but if you say depicting I thought you mean rendering and this 
(obviously) show configurations. If you relayout the structure, they are 
lost, but normally I would not relayout if coordinates are given.
Stefan
>
> -------------------------------------------------------------------
> Rajarshi Guha  <[EMAIL PROTECTED]>
> GPG Fingerprint: 0CCA 8EE2 2EEB 25E2 AB04  06F7 1BB9 E634 9B87 56EE
> -------------------------------------------------------------------
> Q: What do you get when you cross a mosquito with a mountain climber?
> A: Nothing. You can't cross a vector with a scaler.



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