2009/9/1 Thorsten Meinl <thorsten.me...@uni-konstanz.de>:
> There is the CDKHydrogenAdder for adding implicit and explicit hydrogens to
> molecules. But is there a class or method to *remove* explicit hydrogens? I
> suppose just removing all hydrogens from an AtomContainer won't do the trick,
> will it?

It will if you use getAtomAndConnectedBonds()...

Check the AtomContainerManipulator... there might be a convenience method...

Egon

-- 
Post-doc @ Uppsala University
http://chem-bla-ics.blogspot.com/

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