Hello,

Is there a way of sorting the atoms that are included in an IAtomContainer?
Example: I read into a IAtomContainer a SD file where the first atoms are
oxygens, then carbons, and then nitrogens. I would like that in the
IAtomContainer  the atoms are ordered C,O,N, for instance. If I would read a
different SD with atoms ordered N,O,C, the resulting IAtomContainer will
have again C,O,N.
Is there a function in CDK that performs this?

Cheers,
Julio

-- 
Julio E. Peironcely, PhD student
http://juliopeironcely.com
Leiden/Amsterdam Center for Drug Research || Netherlands Metabolomics Centre
peironc...@chem.leidenuniv.nl || pey...@gmail.com
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