Hello! Having failed using the CellML 1.1 spec to generate Java bindings, I'm trying to install the CellML DOM API 1.4 on Kubuntu Gutsty 7.10 and bind it to Java with CORBA. I'm having (several) problems.
1) I can't start the CORBA server. I've found the appropriate files, I think, under CellML_DOM_API_1_4/sources/cellml_corba_server, but I can't actually get the server to start. There appears to be a fragment of a make file in that dir, but I don't know where the super make file is located. A general make on the project doesn't touch that directory. A side thought: there are scripts to start the server in CellML_DOM_API_1_4/scripts/, but they're hard-coded to CELLML_BIN_DIR=/people/amil082/code/CellML_DOM_API. The commented out section #CELLML_BIN_DIR=/usr/sbin points to an empty directory for me. 2) Related to 1), I found the Physiome tracker item #254 (https://tracker.physiomeproject.org/show_bug.cgi?id=254) and saw that the configure script is fairly new, so I did a 'make clean' and 'make distclean' on the project and tried running 'aclocal && autoconf && automake'. That didn't work, so I tried cleaning again, and re-running configure. Now make doesn't work! Output: CellML_DOM_API_1_4$ make make all-recursive make[1]: Entering directory `/home/mtaschuk/Desktop/CellML_DOM_API_1_4' Making all in gsl make[2]: Entering directory `/home/mtaschuk/Desktop/CellML_DOM_API_1_4/gsl' Makefile:314: warning: overriding commands for target `distclean' Makefile:250: warning: ignoring old commands for target `distclean' rm -f gsl*.h HEADERLIST="../gsl*.h ../*/gsl*.h"; \ for h in $HEADERLIST; do \ BASENAME=`basename $h`; \ test -r $BASENAME || ln -s $h $BASENAME; \ done make[2]: Leaving directory `/home/mtaschuk/Desktop/CellML_DOM_API_1_4/gsl' Making all in utils make[2]: Entering directory `/home/mtaschuk/Desktop/CellML_DOM_API_1_4/utils' /bin/bash ../libtool --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -g -O2 -c -o placeholder.lo `test -f 'placeholder.c' || echo './'`placeholder.c ../libtool: line 1314: func_opt_split: command not found libtool: Version mismatch error. This is libtool 2.2, but the libtool: definition of this LT_INIT comes from libtool 2.1a. libtool: You should recreate aclocal.m4 with macros from libtool 2.2 libtool: and run autoconf again. make[2]: *** [placeholder.lo] Error 63 make[2]: Leaving directory `/home/mtaschuk/Desktop/CellML_DOM_API_1_4/utils' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/mtaschuk/Desktop/CellML_DOM_API_1_4' make: *** [all] Error 2 3) I used idlj to generate the Java binding. That worked, but now I have about 400 interfaces in CellML_DOM_API_1_4/interfaces/cellml-api and NO idea where to start. Help? Regards, Morgan On Wed, Jun 18, 2008 at 6:03 AM, Justin Marsh <[EMAIL PROTECTED]> wrote: > Hi all, > > The CellML DOM API 1.4 has now been released at > http://www.cellml.org/downloads/cellml_api/releases/1.4 > > Should you find any bugs in this release, or have feature > requests, please report it to our bugtracker at > https://tracker.physiomeproject.org, or alternatively email > me at [EMAIL PROTECTED] > > Best Regards, > Justin Marsh. > _______________________________________________ > cellml-discussion mailing list > cellml-discussion@cellml.org > http://www.cellml.org/mailman/listinfo/cellml-discussion > _______________________________________________ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
