Thanks Frédéric

I found there is difference in the bluestore_min_alloc_size among the OSDs 
depending on the version they were created on.

However, as I understand there is no way to change it, other than destroy the 
OSD and bring them back in.:

"This BlueStore attribute takes effect only at OSD creation; if the attribute 
is changed later, a specific OSD’s behavior will not change unless and until 
the OSD is destroyed and redeployed with the appropriate option value(s). 
Upgrading to a later Ceph release will not change the value used by OSDs that 
were deployed under older releases or with other settings."
Ref.: 
https://docs.ceph.com/en/reef/rados/configuration/bluestore-config-ref/#minimum-allocation-size

I'm not sure that's an option, unless there is a huge gain in doing that change.

The impact of having this discrepancy between the OSDs, as I understand is 
potential: "unusually high ratio of raw to stored data" on the 65K OSDs.

In my case the ratio between - raw to stored data - is approx 3:1
I'd guess that is what to expect, when all pools is setup with three replicas.

Feel free to correct me if I'm wrong/have misunderstood the DOCS

Anyway. Thanks again for helping me out on this one.

________________________________
From: Frédéric Nass <frederic.n...@univ-lorraine.fr>
Sent: Friday, May 16, 2025 10:04
To: Kasper Rasmussen <kasper_steenga...@hotmail.com>
Cc: Enrico Bocchi <enrico.boc...@cern.ch>; ceph-users <ceph-users@ceph.io>
Subject: Re: [ceph-users] Re: BLUEFS_SPILLOVER after Reef upgrade

Hi Kasper,

Great! I haven't seen any issues after using ceph-bluestore-tool 
bluefs-bdev-migrate to move rocksdb metadata back to fast device.

Since some of your OSDs seem to have been created prior to Pacific, you might 
want to check their bluestore_min_alloc_size. They should all use a 
bluestore_min_alloc_size of 4k.

In Mimic and earlier releases, the default values were 64KB for rotational 
media (HDD) and 16KB for non-rotational media (SSD). The Octopus release 
changed the the default value for non-rotational media (SSD) to 4KB, and the 
Pacific release changed the default value for rotational media (HDD) to 4KB.

You can use the below command to check the bluestore_min_alloc_size of every 
OSD:

for osd in $(ceph osd ls) ; do echo -n "osd.$osd bluestore_min_alloc_size = " ; 
ceph osd metadata osd.${osd} | jq -r .bluestore_min_alloc_size ; done

Regards,
Frédéric.

[1] 
https://docs.ceph.com/en/reef/rados/configuration/bluestore-config-ref/#minimum-allocation-size


----- Le 16 Mai 25, à 8:49, Kasper Rasmussen <kasper_steenga...@hotmail.com> a 
écrit :
FIXED -

So here is what I have tried.


  1.
Stopped osd.110
  2.
Enabled sharding with command:  ceph-bluestore-tool --path ./osd.110 
--sharding="m(3) p(3,0-12) O(3,0-13)=block_cache={type=binned_lru} L P" reshard
  3.
Started osd.110

Result: osd.110 still had spilled over data, but now only 64KiB (went down from 
+2 GiB)

Tried compacting + restart osd.110

Result: No changes..

Tried stopping osd.110 > compacting while offline > started osd.110

Result: No changes..

Finally -


  1.
Stopped osd.110
  2.
ceph-bluestore-tool bluefs-bdev-migrate --path "./osd.110" --devs-source 
"./osd.110/block" --dev-target "./osd.110/block.db"
  3.
Started osd.110

Result: SUCCESS - BLUEFS_SPILLOVER warning gone on osd.110

To be honest I'm not 100% sure if there is any caveats when migrating the data 
with command - ceph-bluestore-tool bluefs-bdev-migrate, so any input on that 
will be much appreciated.



________________________________
From: Frédéric Nass <frederic.n...@univ-lorraine.fr>
Sent: Thursday, May 15, 2025 17:30
To: Kasper Rasmussen <kasper_steenga...@hotmail.com>
Cc: Enrico Bocchi <enrico.boc...@cern.ch>; ceph-users <ceph-users@ceph.io>
Subject: Re: [ceph-users] Re: BLUEFS_SPILLOVER after Reef upgrade


----- Le 15 Mai 25, à 14:47, Kasper Rasmussen <kasper_steenga...@hotmail.com> a 
écrit :
Hi Both

Let me add some findings.

The cluster started on an older-than-pacific version - I don't know which 
version - and has at some point been migrated to Bluestore.

When running a ceph osd metadata <osd.id>, 50% or so of the OSDs has no data in 
the "ceph_version_when_created" the rest has ceph_version_when_created: ceph 
version 16.2.....

So I probably have approx. 50% created-pre-pacific OSDs

Please note that only OSDs created after Pacific v16.2.11 will have the 
"ceph_version_when_created" and "created_at" metadata populated. So 
technically, you could have OSDs created in Pacific, say v16.2.9 using sharded 
RocksDBs.

Also, I wrongly assumed from the config show output that your OSD RocksDBs were 
sharded/resharded, but that was just configuration that could have been set 
after the OSDs creation.
The only way you can make sure if RocksDBs are using column families is how you 
did, by using the ceph-bluestore-tool show-sharding command. I guess you'll 
have to check them all and reshard them when needed.

Please be extremely cautious with the case (m p O L P) in the resharding 
command, as using wrong letters can wreck your OSDs.

Let us know how it goes.

Frédéric.

On a few of the created-pre-pacific OSDs I've executed -
ceph-bluestore-tool --path ./osd.XX show-sharding
With result:
failed to retrieve sharding def

On a few of the others I get results like:
m(3) p(3,0-12) O(3,0-13)=block_cache={type=binned_lru} L P

Also untill now it seems like all the OSD with warnings -
BLUEFS_SPILLOVER
BLUESTORE_SLOW_OP_ALERT (non of these has I/O errors)

Seems to be created-pre-pacific OSDs.
Although I have warnings on a very small percentage of the total number of 
OSDs, it might still be a clue.

I will return to the issue tomorrow



________________________________
From: Frédéric Nass <frederic.n...@univ-lorraine.fr>
Sent: Thursday, May 15, 2025 13:43
To: Kasper Rasmussen <kasper_steenga...@hotmail.com>; Enrico Bocchi 
<enrico.boc...@cern.ch>
Cc: ceph-users <ceph-users@ceph.io>
Subject: Re: [ceph-users] Re: BLUEFS_SPILLOVER after Reef upgrade


Hi Kasper, Hi Enrico,


You're right, Enrico! I misread the numbers. DB is now 11GB in size, not even 
close to 88GB. What probably happened at some point is that RocksDB had to 
allocate more space than 88GB, probably during compaction, and overspilled 
1.9GB to slow device.

If compacting this OSDs twice in a row doesn't help with getting the 1.9GB back 
to fast device, then the below command should:


1/ ceph orch daemon stop osd.${osd}
2/ cephadm shell --fsid $(ceph fsid) --name osd.${osd} -- ceph-bluestore-tool 
bluefs-bdev-migrate --path /var/lib/ceph/osd/ceph-${osd} --devs-source 
/var/lib/ceph/osd/ceph-${osd}/block --dev-target 
/var/lib/ceph/osd/ceph-${osd}/block.db
3/ ceph orch daemon start osd.${osd}
4/ ceph tell osd.${osd} compact


Step 4/ should update bluefs stats figures.


Regarding RocskDB, resharding should not be required as the new layout with 
column families is already being used.


Kasper, can you check the value of bluestore_volume_selection_policy for the 
overspilled OSDs? It should default to 'use_some_extra' that allows RocksDB to 
allocate space between 30GB and 88GB and not overspil to slow device after 
allocating ~30GB.


Also, don't forget to enable RocksDB compression.

Regards,
Frédéric.

----- Le 15 Mai 25, à 13:04, Kasper Rasmussen <kasper_steenga...@hotmail.com> a 
écrit :
Thanks to you both

I was just about to address the used vs total byte thing.

I will look into your pointers Enrico, and return with comments/findings.

________________________________
From: Enrico Bocchi <enrico.boc...@cern.ch>
Sent: Thursday, May 15, 2025 13:00
To: Kasper Rasmussen <kasper_steenga...@hotmail.com>; Frédéric Nass 
<frederic.n...@univ-lorraine.fr>
Cc: ceph-users <ceph-users@ceph.io>
Subject: Re: [ceph-users] Re: BLUEFS_SPILLOVER after Reef upgrade

Hi Kasper,

As Frédéric pointed out, you should consider resharding the RocksDB
database to use column families (if the OSD was create pre-pacific):
https://docs.ceph.com/en/latest/rados/configuration/bluestore-config-ref/#rocksdb-sharding
There's additional documentation available with some preliminary steps,
including making sure your RocksDB does not already use column families.

RocksDB options have changed in recent reef releases, and seem to be
quite different w.r.t. Pacific/Quincy. You may want to check if any of
the configuration options that have been modified are relevant for your
setup.
Here is an excellent deep-dive blog post by the unequaled Mark Nelson:
https://ceph.io/en/news/blog/2022/rocksdb-tuning-deep-dive/

For the used vs total bytes I have to disagree with Frédéric (sorry):
11631853568 / 88906653696 gives 13% utilization. So the OSD should not
overspill to slow storage.
I have seen this in the past and rolling back to previous
bluestore_rocksdb options helped. However, I have not resharded RocksDB
to column families yet. Would you please keep us posted if you reshard
to cf and this fixes overspill?

Cheers,
Enrico


On 5/15/25 12:35, Frédéric Nass wrote:
> Hi Kasper,
>
> Thanks for sharing.
>
> I don't see anything wrong with this specific OSD when it comes to 
> bluestore_rocksdb_*. It's RocksDB database is using column families and this 
> OSD was resharded properly (if not created or recreated in Pacific). What the 
> perf dump shows is that the db_used_bytes is above the db_total_bytes. If 
> this cluster makes heavy use of metadata (RGW workloads for example) then 
> 90GB of DB device for 10TB drives is less than 1% which is not enough. 
> General recommendation for RGW workloads is to use a DB device of at least 4% 
> in size of the data device [1].
>
> Now, your best move is probably to enable RocksDB compression (ceph config 
> set osd bluestore_rocksdb_options_annex 'compression=kLZ4Compression'), 
> restart and compact these OSDs to update bluefs stats, and consider giving 
> those OSDs larger RocksDB partitions in the future.
>
> Regards,
> Frédéric.
>
> [1] 
> https://docs.ceph.com/en/latest/rados/configuration/bluestore-config-ref/#sizing
>
> ----- Le 15 Mai 25, à 7:44, Kasper Rasmussen kasper_steenga...@hotmail.com a 
> écrit :
>
>> perf dump:
>> "bluefs": {
>> "db_total_bytes": 88906653696,
>> "db_used_bytes": 11631853568,
>> "wal_total_bytes": 0,
>> "wal_used_bytes": 0,
>> "slow_total_bytes": 9796816207872,
>> "slow_used_bytes": 1881341952,
>> "num_files": 229,
>> "log_bytes": 11927552,
>> "log_compactions": 78,
>> "log_write_count": 281792,
>> "logged_bytes": 1154220032,
>> "files_written_wal": 179,
>> "files_written_sst": 311,
>> "write_count_wal": 280405,
>> "write_count_sst": 29432,
>> "bytes_written_wal": 4015595520,
>> "bytes_written_sst": 15728308224,
>> "bytes_written_slow": 2691231744,
>> "max_bytes_wal": 0,
>> "max_bytes_db": 13012828160,
>> "max_bytes_slow": 3146252288,
>> "alloc_unit_slow": 65536,
>> "alloc_unit_db": 1048576,
>> "alloc_unit_wal": 0,
>> "read_random_count": 1871590,
>> "read_random_bytes": 18959576586,
>> "read_random_disk_count": 563421,
>> "read_random_disk_bytes": 17110012647,
>> "read_random_disk_bytes_wal": 0,
>> "read_random_disk_bytes_db": 11373755941,
>> "read_random_disk_bytes_slow": 5736256706,
>> "read_random_buffer_count": 1313456,
>> "read_random_buffer_bytes": 1849563939,
>> "read_count": 275731,
>> "read_bytes": 4825912551,
>> "read_disk_count": 225997,
>> "read_disk_bytes": 4016943104,
>> "read_disk_bytes_wal": 0,
>> "read_disk_bytes_db": 3909947392,
>> "read_disk_bytes_slow": 106999808,
>> "read_prefetch_count": 274534,
>> "read_prefetch_bytes": 4785141168,
>> "write_count": 591760,
>> "write_disk_count": 591838,
>> "write_bytes": 21062987776,
>> "compact_lat": {
>> "avgcount": 78,
>> "sum": 0.572247346,
>> "avgtime": 0.007336504
>> },
>> "compact_lock_lat": {
>> "avgcount": 78,
>> "sum": 0.182746199,
>> "avgtime": 0.002342899
>> },
>> "alloc_slow_fallback": 0,
>> "alloc_slow_size_fallback": 0,
>> "read_zeros_candidate": 0,
>> "read_zeros_errors": 0,
>> "wal_alloc_lat": {
>> "avgcount": 0,
>> "sum": 0.000000000,
>> "avgtime": 0.000000000
>> },
>> "db_alloc_lat": {
>> "avgcount": 969,
>> "sum": 0.006368060,
>> "avgtime": 0.000006571
>> },
>> "slow_alloc_lat": {
>> "avgcount": 39,
>> "sum": 0.004502210,
>> "avgtime": 0.000115441
>> },
>> "alloc_wal_max_lat": 0.000000000,
>> "alloc_db_max_lat": 0.000113831,
>> "alloc_slow_max_lat": 0.000301347
>> },
>>
>>
>> config show:
>> "bluestore_rocksdb_cf": "true",
>> "bluestore_rocksdb_cfs": "m(3) p(3,0-12) 
>> O(3,0-13)=block_cache={type=binned_lru}
>> L=min_write_buffer_number_to_merge=32 P=min_write_buffer_number_to_merge=32",
>> "bluestore_rocksdb_options":
>> "compression=kLZ4Compression,max_write_buffer_number=64,min_write_buffer_number_to_merge=6,compaction_style=kCompactionStyleLevel,write_buffer_size=16777216,max_background_jobs=4,level0_file_num_compaction_trigger=8,max_bytes_for_level_base=1073741824,max_bytes_for_level_multiplier=8,compaction_readahead_size=2MB,max_total_wal_size=1073741824,writable_file_max_buffer_size=0",
>> "bluestore_rocksdb_options_annex": "",
>>
>>
>> Dono if it is of any help, but I've compared the config from an OSD not
>> reporting an issues, and there is no difference.
>>
>>
>> ________________________________
>> From: Enrico Bocchi <enrico.boc...@cern.ch>
>> Sent: Wednesday, May 14, 2025 22:47
>> To: Kasper Rasmussen <kasper_steenga...@hotmail.com>; ceph-users
>> <ceph-users@ceph.io>
>> Subject: Re: BLUEFS_SPILLOVER after Reef upgrade
>>
>> Hi Kasper,
>>
>> Would you mind sharing the output of `perf dump` and `config show` from the
>> daemon socket of one of the OSDs reporting blues spillover? I am interested 
>> in
>> the bluefs part of the former and in the bluestore_rocksdb options of the
>> latter.
>>
>> The warning about slow ops in bluestore is a different story. There have been
>> several messages on this mailing list recently with suggestions on how to 
>> tune
>> the alert threshold. From my experience, they very likely relate to some
>> problem with the underlying storage device, so I'd recommend investigating 
>> the
>> root cause rather than simply silencing the warning.
>>
>> Cheers,
>> Enrico
>>
>>
>> ________________________________
>> From: Kasper Rasmussen <kasper_steenga...@hotmail.com>
>> Sent: Wednesday, May 14, 2025 8:22:46 PM
>> To: ceph-users <ceph-users@ceph.io>
>> Subject: [ceph-users] BLUEFS_SPILLOVER after Reef upgrade
>>
>> I've just upgraded our ceph cluster from pacific 16.2.15 -> Reef 18.2.7
>>
>> After that I see the warnings:
>>
>> [WRN] BLUEFS_SPILLOVER: 5 OSD(s) experiencing BlueFS spillover
>>      osd.110 spilled over 4.5 GiB metadata from 'db' device (8.0 GiB used of 
>> 83 GiB)
>>      to slow device
>>      osd.455 spilled over 1.1 GiB metadata from 'db' device (11 GiB used of 
>> 83 GiB)
>>      to slow device
>>      osd.533 spilled over 426 MiB metadata from 'db' device (10 GiB used of 
>> 83 GiB)
>>      to slow device
>>      osd.560 spilled over 389 MiB metadata from 'db' device (9.8 GiB used of 
>> 83 GiB)
>>      to slow device
>>      osd.597 spilled over 8.6 GiB metadata from 'db' device (7.7 GiB used of 
>> 83 GiB)
>>      to slow device
>> [WRN] BLUESTORE_SLOW_OP_ALERT: 4 OSD(s) experiencing slow operations in
>> BlueStore
>>      osd.410 observed slow operation indications in BlueStore
>>      osd.443 observed slow operation indications in BlueStore
>>      osd.508 observed slow operation indications in BlueStore
>>      osd.593 observed slow operation indications in BlueStore
>>
>> I've tried to run  ceph tell osd.XXX compact with no result.
>>
>> Bluefs stats:
>>
>> ceph tell osd.110 bluefs stats
>> 1 : device size 0x14b33fe000 : using 0x202c00000(8.0 GiB)
>> 2 : device size 0x8e8ffc00000 : using 0x5d31d150000(5.8 TiB)
>> RocksDBBlueFSVolumeSelector
>>>> Settings<< extra=0 B, l0_size=1 GiB, l_base=1 GiB, l_multi=8 B
>> DEV/LEV     WAL         DB          SLOW        *           *           REAL
>> FILES
>> LOG         0 B         16 MiB      0 B         0 B         0 B         15 
>> MiB
>> 1
>> WAL         0 B         18 MiB      0 B         0 B         0 B         6.3 
>> MiB
>> 1
>> DB          0 B         8.0 GiB     0 B         0 B         0 B         8.0 
>> GiB
>> 140
>> SLOW        0 B         0 B         4.5 GiB     0 B         0 B         4.5 
>> GiB
>> 78
>> TOTAL       0 B         8.0 GiB     4.5 GiB     0 B         0 B         0 B
>> 220
>> MAXIMUMS:
>> LOG         0 B         25 MiB      0 B         0 B         0 B         21 
>> MiB
>> WAL         0 B         118 MiB     0 B         0 B         0 B         93 
>> MiB
>> DB          0 B         8.2 GiB     0 B         0 B         0 B         8.2 
>> GiB
>> SLOW        0 B         0 B         14 GiB      0 B         0 B         14 
>> GiB
>> TOTAL       0 B         8.2 GiB     14 GiB      0 B         0 B         0 B
>>>> SIZE <<  0 B         79 GiB      8.5 TiB
>> Help with what to do next will, be much appreciated
>>
>>
>> _______________________________________________
>> ceph-users mailing list -- ceph-users@ceph.io
>> To unsubscribe send an email to ceph-users-le...@ceph.io
>>
>> _______________________________________________
>> ceph-users mailing list -- ceph-users@ceph.io
>> To unsubscribe send an email to ceph-users-le...@ceph.io

--
Enrico Bocchi
CERN European Laboratory for Particle Physics
IT - Storage & Data Management  - General Storage Services
Mailbox: G20500 - Office: 31-2-010
1211 Genève 23
Switzerland




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