I am working in similar environment and never faced problem like that.
All I can say is that we are working with custom JTOpen JDBC driver 
http://www-03.ibm.com/systems/i/software/toolbox/ (jt400.jar is all you need)

JDBC URL: jdbc:as400://<server_ip_address>;libraries=<list_of_libraries>;date 
format=iso;time format=iso;naming=system;transaction 
isolation=none;errors=full;cursor hold=false;extended 
dynamic=true;secure=false;trace=false;data compression=true

Driver class: com.ibm.as400.access.AS400JDBCDriver

We are working on DB2 V5R4 i5/OS @ AS/400

Hope this helps

Best Regards,
Marko Simic

>I know it's usually pretty pointless to post my DB2 issues to cf-talk
>but it's always worth a shot.
>
>I have an issue (64 bit coldfusion 8.0.1 multi-server on Win2k8)
>where, if I do a simple query to our DB2 mainframe database, the
>exclamation mark character in any string fields is returned as a right
>closing bracket instead.  I believe this is because the driver or
>wrapper is improperly translating the exclamation mark from the EBCDIC
>character set into ASCII - supposed to be ascii 33 but is coming
>through as ascii 93 instead.
>
>I think this might be specific to coldfusion's JDBC wrapper, because
>it occurs when I use the built in JDBC driver (from Data Direct, I
>think), as well as a third party JDBC driver that we purchased
>(StarSQL DB2).
>
>I suspect I need to call Adobe on this, but thought I'd hit the list first.
>
>Rick 

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